Uses of Class
uk.ac.ebi.microarray.zooma.eval.BadOutcomeException

Packages that use BadOutcomeException

uk.ac.ebi.microarray.zooma.eval
uk.ac.ebi.microarray.zooma.mapping
uk.ac.ebi.microarray.zooma.service
uk.ac.ebi.microarray.zooma.service.impl

Uses of BadOutcomeException in uk.ac.ebi.microarray.zooma.eval

Methods in uk.ac.ebi.microarray.zooma.eval that throw BadOutcomeException

void	FailureReportWriterDecorator.apply() When applied, this outcome will write a report on itself to it's file.
void	ReportWriterDecorator.apply() When applied, this outcome will write a report on itself to it's file.
void	JSONProducerDecorator.apply()
void	OntologyMappingOutcomeDecorator.apply()
void	OntologyMappingOutcome.apply() Applies the current outcome.
OntologyMappingOutcome	OntologyMappingEvaluator.evaluateOutcome(Value value, java.util.Collection<OntologyMappingHypothesis> hypotheses) Evaluates the ontology mapping outcome for a collection of mapping hypotheses.
OntologyMappingOutcome	DefaultMappingEvaluator.evaluateOutcome(Value value, java.util.Collection<OntologyMappingHypothesis> hypotheses) Incrementally performs simple pairwise comparison.

Uses of BadOutcomeException in uk.ac.ebi.microarray.zooma.mapping

Methods in uk.ac.ebi.microarray.zooma.mapping that throw BadOutcomeException

void	TextReportingMapper.applyOutcome(OntologyMappingOutcome outcome)
void	JSONOntologyMapper.applyOutcome(OntologyMappingOutcome outcome)
void	OntologyMapper.applyOutcome(OntologyMappingOutcome outcome) Assesses and applies, the given outcome.
OntologyMappingOutcome	TextReportingMapper.generateOutcome(Value value)
OntologyMappingOutcome	JSONOntologyMapper.generateOutcome(Value value)
OntologyMappingOutcome	OntologyMapper.generateOutcome(Value value) Generates an OntologyMappingOutcome given a description and a mapping context.

Uses of BadOutcomeException in uk.ac.ebi.microarray.zooma.service

Methods in uk.ac.ebi.microarray.zooma.service that throw BadOutcomeException

net.sf.json.JSONObject

ZoomaService.generateMappings(java.lang.String value) Generates a JSON object describing the mappings between the supplied value and ontology terms.

Uses of BadOutcomeException in uk.ac.ebi.microarray.zooma.service.impl

Methods in uk.ac.ebi.microarray.zooma.service.impl that throw BadOutcomeException

net.sf.json.JSONObject

BasicZoomaService.generateMappings(java.lang.String value) Generates a JSON object that encapsulates any mappings generated by ZOOMA for the value specified.