uk.ac.ebi.microarray.zooma.eval
Class ReportWriterDecorator

java.lang.Object
  uk.ac.ebi.microarray.zooma.eval.OntologyMappingOutcomeDecorator
      uk.ac.ebi.microarray.zooma.eval.ReportWriterDecorator

All Implemented Interfaces:

OntologyMappingOutcome

public class ReportWriterDecorator
extends OntologyMappingOutcomeDecorator

An outcome decorator that decorates an outcome with the ability to generate text reports whenever the outcome is applied.

Author:

Tony Burdett

Constructor Summary

protected

ReportWriterDecorator(OntologyMappingOutcome outcome)

Method Summary

void	apply() When applied, this outcome will write a report on itself to it's file.
static OntologyMappingOutcome	generateTextReportOutcome(OntologyMappingOutcome outcome, TextReportWriter reportWriter)
TextReportWriter	getReportWriter()
void	setReportWriter(TextReportWriter reportWriter)

Methods inherited from class uk.ac.ebi.microarray.zooma.eval.OntologyMappingOutcomeDecorator

getBestHypotheses, getOutcome, getUnmappedValue, isAutomaticallyAcceptable

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ReportWriterDecorator

protected ReportWriterDecorator(OntologyMappingOutcome outcome)

Method Detail

generateTextReportOutcome

public static OntologyMappingOutcome generateTextReportOutcome(OntologyMappingOutcome outcome,
                                                               TextReportWriter reportWriter)

getReportWriter

public TextReportWriter getReportWriter()

setReportWriter

public void setReportWriter(TextReportWriter reportWriter)

apply

public void apply()
           throws BadOutcomeException

When applied, this outcome will write a report on itself to it's file.

Specified by:

apply in interface OntologyMappingOutcome

Overrides:

apply in class OntologyMappingOutcomeDecorator

Throws:

BadOutcomeException