Package uk.ac.ebi.microarray.zooma.eval

Interface Summary

OntologyMappingEvaluator	Evaluates ontology mapping hypotheses and produces an outcome based on assessments performed.
OntologyMappingOutcome	The outcome of an ontology mapping process.

Class Summary

BasicZoomaOutcome	A default outcome implementation that simply records the set of valued hypotheses and does nothing when applied.
CurationDecorator	An outcome of a mapping process that indicates some curation is required in order to know which of the several possible mapping hypotheses should be accepted.
DefaultMappingEvaluator	A basic implementation of an OntologyMappingEvaluator that utilises a mapping tracker and calculator to do incremental pairwise assessments of outcomes.
FailureReportWriterDecorator	Javadocs go here!
JSONProducerDecorator	A decorator that has the ability to generate a JSON object from an outcome once applied.
OntologyMappingOutcomeDecorator	An abstract class that implements OntologyMappingOutcome and follows the decorator pattern.
ReportWriterDecorator	An outcome decorator that decorates an outcome with the ability to generate text reports whenever the outcome is applied.

Exception Summary

BadOutcomeException

An exception thrown whenever an OntologyMappingOutcome cannot be evaluated, generated or applied.