uk.ac.ebi.microarray.zooma.misc
Class TestOntocat

java.lang.Object
  junit.framework.Assert
      junit.framework.TestCase
          uk.ac.ebi.microarray.zooma.misc.TestOntocat

All Implemented Interfaces:

junit.framework.Test

public class TestOntocat
extends junit.framework.TestCase

Tests retrieval of ontology terms using ontocat

Author:

Tony Burdett

Constructor Summary

TestOntocat()

Method Summary

protected void	setUp()
protected void	tearDown()
void	testFetchExistsTerms()
void	testFetchExistsTermsFromBioportal()
void	testFetchExistsTermsFromFile()
void	testFetchExistsTermsFromOLS()
void	testFetchForTerm()
void	testFetchInParallel()
void	testFetchNotExistsTerms()
void	testFetchNotExistsTermsFromBioportal()
void	testFetchNotExistsTermsFromFile()
void	testFetchNotExistsTermsFromOLS()
void	testFetchOntology()
void	testGetOntology()

Methods inherited from class junit.framework.TestCase

countTestCases, createResult, getName, run, run, runBare, runTest, setName, toString

Methods inherited from class junit.framework.Assert

assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertEquals, assertFalse, assertFalse, assertNotNull, assertNotNull, assertNotSame, assertNotSame, assertNull, assertNull, assertSame, assertSame, assertTrue, assertTrue, fail, fail, failNotEquals, failNotSame, failSame, format

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

TestOntocat

public TestOntocat()

Method Detail

setUp

protected void setUp()
              throws java.lang.Exception

Overrides:

setUp in class junit.framework.TestCase

Throws:

java.lang.Exception

tearDown

protected void tearDown()
                 throws java.lang.Exception

Overrides:

tearDown in class junit.framework.TestCase

Throws:

java.lang.Exception

testFetchNotExistsTerms

public void testFetchNotExistsTerms()

testFetchNotExistsTermsFromBioportal

public void testFetchNotExistsTermsFromBioportal()

testFetchNotExistsTermsFromOLS

public void testFetchNotExistsTermsFromOLS()

testFetchNotExistsTermsFromFile

public void testFetchNotExistsTermsFromFile()

testFetchExistsTerms

public void testFetchExistsTerms()

testFetchExistsTermsFromBioportal

public void testFetchExistsTermsFromBioportal()

testFetchExistsTermsFromOLS

public void testFetchExistsTermsFromOLS()

testFetchExistsTermsFromFile

public void testFetchExistsTermsFromFile()

testFetchOntology

public void testFetchOntology()

testGetOntology

public void testGetOntology()

testFetchInParallel

public void testFetchInParallel()

testFetchForTerm

public void testFetchForTerm()